Transcript: Strc-001 OTTMUST00000036173.1

Description

stereocilin

Location

About this transcript

This transcript has 29 exons and is annotated with 19 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Strc-001	OTTMUST00000036173.1	5756	1809aa	OTTMUSP00000016253	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16641	Q8VIM6
Strc-004	OTTMUST00000063572.2	1059	108aa	OTTMUSP00000038625	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6UNX5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Strc-003	OTTMUST00000063571.3	566	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Strc-002	OTTMUST00000036174.1	2067	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Strc-005	OTTMUST00000063573.1	468	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 29 Transcript length: 5,756 bps Translation length: 1,809 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS16641

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 10/02/2006)

Alternative symbols

RP23-433P19.4-001

Other assemblies

This transcript maps to 121,363,728-121,380,940 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000038389

Curation Method

Manual annotation from Havana