Transcript: Cd40-001 OTTMUST00000039545.1

Description

CD40 antigen

Location

About this transcript

This transcript has 9 exons and is annotated with 25 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cd40-001	OTTMUST00000039545.1	2986	289aa	OTTMUSP00000017667	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17069	P27512
Cd40-005	OTTMUST00000039753.1	668	203aa	OTTMUSP00000017739	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17071	-
Cd40-003	OTTMUST00000039751.2	391	121aa	OTTMUSP00000017738	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A2A5L7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Cd40-002	OTTMUST00000039546.3	1062	234aa	OTTMUSP00000065403	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Cd40-004	OTTMUST00000039752.2	348	44aa	OTTMUSP00000065402	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	S4R2M8
Cd40-006	OTTMUST00000039754.1	545	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 2,986 bps Translation length: 289 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17069

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 05/02/2013 (Created on 24/03/2006)

Alternative symbols

RP23-428M13.1-001

Remarks

I830018M08Rik, I830083B08Rik, I830083N08Rik, I830091M24Rik, 6530420O18Rik, 9030418E17Rik, F830034E13Rik

Other assemblies

This transcript maps to 165,055,627-165,072,948 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000017799

Curation Method

Manual annotation from Havana