Transcript: Scn3b-001 OTTMUST00000040660.2

Description

sodium channel, voltage-gated, type III, beta

Location

Chromosome 9: 40,269,217-40,291,618 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000016755 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Scn3b-001	OTTMUST00000040660.2	4150	215aa	OTTMUSP00000018173	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23080	Q8BHK2
Scn3b-008	OTTMUST00000110659.1	4090	175aa	OTTMUSP00000061760	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS72214	H3BJR6
Scn3b-005	OTTMUST00000110663.3	4045	215aa	OTTMUSP00000061762	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23080	H3BJ27
Scn3b-003	OTTMUST00000110662.1	4024	215aa	OTTMUSP00000061761	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23080	Q8BHK2
Scn3b-004	OTTMUST00000110664.1	672	120aa	OTTMUSP00000061763	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BKP5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Scn3b-009	OTTMUST00000153675.1	385	57aa	OTTMUSP00000079519	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Scn3b-007	OTTMUST00000110658.1	704	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Scn3b-002	OTTMUST00000110660.1	1507	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Scn3b-006	OTTMUST00000110661.1	600	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 4,150 bps Translation length: 215 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS23080

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 15/06/2016 (Created on 19/04/2006)

Alternative symbols

RP24-401C17.1-001

Remarks

4833414B02Rik

Other assemblies

This transcript maps to 40,269,217-40,291,618 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000049941

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Scn3b-001 OTTMUST00000040660.2

Summary

Transcript-based displays