Transcript: Hdac11-001 OTTMUST00000041896.1

Description

histone deacetylase 11

Location

Chromosome 6: 91,156,665-91,174,692 forward strand.

About this transcript

This transcript has 10 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000017285 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Hdac11-001	OTTMUST00000041896.1	2653	347aa	OTTMUSP00000018842	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20366	Q543U1
Hdac11-002	OTTMUST00000041897.2	1251	264aa	OTTMUSP00000018843	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Hdac11-005	OTTMUST00000041900.2	536	172aa	OTTMUSP00000018844	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Hdac11-007	OTTMUST00000142237.1	198	26aa	OTTMUSP00000074244	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Hdac11-006	OTTMUST00000041901.1	815	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hdac11-003	OTTMUST00000041898.2	738	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hdac11-004	OTTMUST00000041899.2	688	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 2,653 bps Translation length: 347 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20366

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 08/06/2015 (Created on 02/06/2006)

Alternative symbols

RP24-239L16.1-001

Other assemblies

This transcript maps to 91,156,665-91,174,692 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000041736

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Hdac11-001 OTTMUST00000041896.1

Summary

Transcript-based displays