Transcript: Smarca1-002 OTTMUST00000042325.1

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1

Location

About this transcript

This transcript has 24 exons and is annotated with 31 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Smarca1-007	OTTMUST00000042330.1	4798	1046aa	OTTMUSP00000019019	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS30104	Q6PGB8
Smarca1-001	OTTMUST00000042269.2	4024	1046aa	OTTMUSP00000018992	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS30104	Q6PGB8
Smarca1-002	OTTMUST00000042325.1	3991	1062aa	OTTMUSP00000019014	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS72374	-
Smarca1-004	OTTMUST00000042327.3	2304	768aa	OTTMUSP00000019016	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6Z6F4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Smarca1-003	OTTMUST00000042331.2	1965	381aa	OTTMUSP00000058195	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q8BS67
Smarca1-005	OTTMUST00000042328.2	360	117aa	OTTMUSP00000019017	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Smarca1-006	OTTMUST00000042329.2	409	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 24 Transcript length: 3,991 bps Translation length: 1,062 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS72374

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 08/06/2006)

Alternative symbols

RP23-274H16.1-002

Other assemblies

This transcript maps to 47,809,370-47,892,519 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000101616

Curation Method

Manual annotation from Havana