Transcript: Cirbp-001 OTTMUST00000045723.1

Description

cold inducible RNA binding protein

Location

Chromosome 10: 80,167,778-80,171,655 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000000003 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cirbp-001	OTTMUST00000045723.1	1321	172aa	OTTMUSP00000020590	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35975	P60824
Cirbp-007	OTTMUST00000045847.2	423	108aa	OTTMUSP00000020654	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YU80	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Cirbp-005	OTTMUST00000045727.1	834	168aa	OTTMUSP00000020591	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	K4DI65
Cirbp-002	OTTMUST00000045724.1	912	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Cirbp-003	OTTMUST00000045725.1	894	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Cirbp-006	OTTMUST00000045728.1	593	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Cirbp-004	OTTMUST00000045726.1	376	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 1,321 bps Translation length: 172 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35975

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 20/09/2016 (Created on 01/08/2006)

Alternative symbols

RP23-6P9.6-001

Other assemblies

This transcript maps to 80,167,778-80,171,655 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000105365

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Cirbp-001 OTTMUST00000045723.1

Summary

Transcript-based displays