Transcript: Hsp90ab1-001 OTTMUST00000047842.1

Description

heat shock protein 90kDa alpha (cytosolic), class B member 1

Location

Chromosome 17: 45,567,775-45,573,271 reverse strand.

About this transcript

This transcript has 11 exons and is annotated with 24 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000020123 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Hsp90ab1-001	OTTMUST00000047842.1	2520	724aa	OTTMUSP00000021764	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS28812	Q71LX8
Hsp90ab1-006	OTTMUST00000090393.2	656	189aa	OTTMUSP00000049580	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q3D6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Hsp90ab1-008	OTTMUST00000090392.2	572	161aa	OTTMUSP00000049579	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q0C3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Hsp90ab1-002	OTTMUST00000047843.3	351	76aa	OTTMUSP00000021765	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z1R1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Hsp90ab1-007	OTTMUST00000090394.1	703	112aa	OTTMUSP00000049581	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9PX27
Hsp90ab1-005	OTTMUST00000047846.1	797	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hsp90ab1-003	OTTMUST00000047844.1	764	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hsp90ab1-004	OTTMUST00000047845.1	685	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 2,520 bps Translation length: 724 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28812

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 07/09/2006)

Alternative symbols

RP24-86D16.1-001

Other assemblies

This transcript maps to 45,567,775-45,573,271 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000024739

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Hsp90ab1-001 OTTMUST00000047842.1

Summary

Transcript-based displays