Transcript: l7Rn6-001 OTTMUST00000055454.2

Description

lethal, Chr 7, Rinchik 6

Location

Chromosome 7: 89,917,529-89,941,204 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000023022 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
l7Rn6-001	OTTMUST00000055454.2	2224	197aa	OTTMUSP00000026557	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21445	Q9DD02
l7Rn6-006	OTTMUST00000055459.3	715	158aa	OTTMUSP00000026558	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS80748	-
l7Rn6-008	OTTMUST00000146365.1	835	130aa	OTTMUSP00000076206	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140LJ25
l7Rn6-005	OTTMUST00000055458.2	772	100aa	OTTMUSP00000076207	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140LIK3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
l7Rn6-004	OTTMUST00000055457.2	364	22aa	OTTMUSP00000076208	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140LIZ9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
l7Rn6-003	OTTMUST00000055456.2	1053	90aa	OTTMUSP00000041434	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G5E8I4
l7Rn6-002	OTTMUST00000055455.3	806	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
l7Rn6-007	OTTMUST00000146366.1	2539	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 2,224 bps Translation length: 197 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21445

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 29/09/2015 (Created on 09/02/2007)

Alternative symbols

AC165077.1-001

Other assemblies

This transcript maps to 89,917,529-89,941,204 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000153470

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: l7Rn6-001 OTTMUST00000055454.2

Summary

Transcript-based displays