Transcript: Arntl2-001 OTTMUST00000057210.1

Description

aryl hydrocarbon receptor nuclear translocator-like 2

Location

Chromosome 6: 146,796,065-146,833,529 forward strand.

About this transcript

This transcript has 17 exons and is annotated with 29 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000023496 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Arntl2-001	OTTMUST00000057210.1	2923	579aa	OTTMUSP00000027581	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20702	Q2VPD4
Arntl2-003	OTTMUST00000057212.2	1713	570aa	OTTMUSP00000027582	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS80640	E9Q994
Arntl2-005	OTTMUST00000057214.1	1710	569aa	OTTMUSP00000027584	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS80641	E9Q993
Arntl2-004	OTTMUST00000057213.1	1664	199aa	OTTMUSP00000027583	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Arntl2-002	OTTMUST00000057211.1	238	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Arntl2-007	OTTMUST00000141002.1	2999	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Arntl2-008	OTTMUST00000141001.1	907	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Arntl2-006	OTTMUST00000057215.1	647	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 17 Transcript length: 2,923 bps Translation length: 579 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20702

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 28/02/2007)

Alternative symbols

RP23-359M3.1-001

Other assemblies

This transcript maps to 146,796,065-146,833,529 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000111639

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Arntl2-001 OTTMUST00000057210.1

Summary

Transcript-based displays