Transcript: Chmp3-002 OTTMUST00000057483.1

Description

vacuolar protein sorting 24 (yeast)

Location

Chromosome 6: 71,543,917-71,582,609 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000023566 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Chmp3-001	OTTMUST00000057482.1	2654	224aa	OTTMUSP00000027729	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20232	Q9CQ10
Chmp3-002	OTTMUST00000057483.1	998	224aa	OTTMUSP00000027730	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20232	Q9CQ10
Chmp3-007	OTTMUST00000142256.2	413	59aa	OTTMUSP00000074247	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SVS3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Chmp3-008	OTTMUST00000142257.2	350	96aa	OTTMUSP00000074249	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SUX9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Chmp3-005	OTTMUST00000057486.2	356	41aa	OTTMUSP00000074248	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Chmp3-004	OTTMUST00000057485.1	387	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Chmp3-003	OTTMUST00000057484.1	347	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Chmp3-006	OTTMUST00000057487.1	436	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 998 bps Translation length: 224 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20232

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/10/2013 (Created on 05/03/2007)

Alternative symbols

RP23-402P24.1-002

Other assemblies

This transcript maps to 71,543,917-71,582,609 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000065364

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Chmp3-002 OTTMUST00000057483.1

Summary

Transcript-based displays