Transcript: Lpcat3-001 OTTMUST00000057553.2

Description

lysophosphatidylcholine acyltransferase 3

Location

Chromosome 6: 124,663,027-124,704,418 forward strand.

About this transcript

This transcript has 13 exons and is annotated with 13 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000023580 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Lpcat3-001	OTTMUST00000057553.2	2281	487aa	OTTMUSP00000027766	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20523	Q91V01
Lpcat3-004	OTTMUST00000057556.2	771	99aa	OTTMUSP00000073363	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N4SUM3
Lpcat3-007	OTTMUST00000057559.1	533	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Lpcat3-002	OTTMUST00000057554.1	2373	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Lpcat3-008	OTTMUST00000057560.1	820	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Lpcat3-009	OTTMUST00000057561.1	732	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Lpcat3-005	OTTMUST00000057557.2	667	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Lpcat3-003	OTTMUST00000057555.1	550	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Lpcat3-006	OTTMUST00000057558.1	448	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 2,281 bps Translation length: 487 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20523

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 20/03/2015 (Created on 07/03/2007)

Alternative symbols

RP24-297C1.5-001

Other assemblies

This transcript maps to 124,663,027-124,704,418 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000004381

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Lpcat3-001 OTTMUST00000057553.2

Summary

Transcript-based displays