Transcript: Ssc4d-002 OTTMUST00000057739.1

Description

scavenger receptor cysteine rich family, 4 domains

Location

About this transcript

This transcript has 11 exons and is annotated with 36 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ssc4d-001	OTTMUST00000057738.1	2745	586aa	OTTMUSP00000027884	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51664	A1L0T3
Ssc4d-002	OTTMUST00000057739.1	2745	586aa	OTTMUSP00000027885	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51664	A1L0T3
Ssc4d-003	OTTMUST00000057740.1	1191	134aa	OTTMUSP00000027886	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3X988
Ssc4d-005	OTTMUST00000057742.2	819	174aa	OTTMUSP00000027888	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YUQ6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Ssc4d-007	OTTMUST00000057769.2	498	166aa	OTTMUSP00000027913	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7AS28	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Ssc4d-004	OTTMUST00000057741.1	459	108aa	OTTMUSP00000027887	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YZ07
Ssc4d-006	OTTMUST00000057743.2	348	116aa	OTTMUSP00000027889	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6ZA92	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Summary

Statistics

Exons: 11 Transcript length: 2,745 bps Translation length: 586 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51664

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 09/03/2007)

Alternative symbols

AC087420.2-002

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 135,960,211-135,974,531 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000111153

Curation Method

Manual annotation from Havana