Transcript: Srpk1-001 OTTMUST00000059342.1

Description

serine/arginine-rich protein specific kinase 1

Location

Chromosome 17: 28,587,648-28,622,521 reverse strand.

About this transcript

This transcript has 16 exons and is annotated with 20 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000024247 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Srpk1-001	OTTMUST00000059342.1	4465	648aa	OTTMUSP00000028859	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS37531	Q3UB06
Srpk1-005	OTTMUST00000059346.1	445	35aa	OTTMUSP00000028861	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B2KF32
Srpk1-002	OTTMUST00000059343.1	1983	215aa	OTTMUSP00000028860	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WGJ7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Srpk1-004	OTTMUST00000059345.1	4956	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Srpk1-003	OTTMUST00000059344.1	930	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Srpk1-007	OTTMUST00000059348.1	554	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Srpk1-006	OTTMUST00000059347.1	516	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 4,465 bps Translation length: 648 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37531

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 21/11/2012 (Created on 29/03/2007)

Alternative symbols

RP23-480B9.4-001

Other assemblies

This transcript maps to 28,587,648-28,622,521 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000130643

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Srpk1-001 OTTMUST00000059342.1

Summary

Transcript-based displays