Transcript: Nsun5-001 OTTMUST00000059677.1

Description

NOL1/NOP2/Sun domain family, member 5

Location

Chromosome 5: 135,369,953-135,376,798 forward strand.

About this transcript

This transcript has 10 exons and is annotated with 15 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000024361 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Nsun5-001	OTTMUST00000059677.1	2243	465aa	OTTMUSP00000029049	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19740	Q8K4F6
Nsun5-009	OTTMUST00000138325.1	597	142aa	OTTMUSP00000072736	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Nsun5-007	OTTMUST00000089938.1	385	91aa	OTTMUSP00000049209	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Nsun5-003	OTTMUST00000059679.1	415	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Nsun5-002	OTTMUST00000059678.2	1991	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Nsun5-008	OTTMUST00000138326.1	1965	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Nsun5-006	OTTMUST00000059682.2	952	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Nsun5-004	OTTMUST00000059680.1	729	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Nsun5-005	OTTMUST00000059681.1	668	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 2,243 bps Translation length: 465 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19740

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/01/2015 (Created on 03/04/2007)

Alternative symbols

AC024608.1-001

Other assemblies

This transcript maps to 135,369,953-135,376,798 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000000940

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Nsun5-001 OTTMUST00000059677.1

Summary

Transcript-based displays