Transcript: Sergef-001 OTTMUST00000062581.2

Description

secretion regulating guanine nucleotide exchange factor

Location

About this transcript

This transcript has 11 exons and is annotated with 27 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sergef-001	OTTMUST00000062581.2	1465	464aa	OTTMUSP00000030870	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21279	Q80YD6
Sergef-002	OTTMUST00000062582.1	722	198aa	OTTMUSP00000030871	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z5A9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Sergef-007	OTTMUST00000152105.1	2551	389aa	OTTMUSP00000078873	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Sergef-003	OTTMUST00000062583.1	671	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Sergef-006	OTTMUST00000062586.1	662	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Sergef-004	OTTMUST00000062584.1	778	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 1,465 bps Translation length: 464 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21279

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 26/10/2015 (Created on 21/05/2007)

Alternative symbols

AC090652.1-001

Remarks

NP_038817.1

Other assemblies

This transcript maps to 46,443,154-46,639,807 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000033127

Curation Method

Manual annotation from Havana