Transcript: Ush1c-001 OTTMUST00000064135.2

Description

Usher syndrome 1C homolog (human)

Location

About this transcript

This transcript has 27 exons and is annotated with 32 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Ush1c-001	OTTMUST00000064135.2	3072	910aa	OTTMUSP00000031809	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21276	E9QMN1
Ush1c-003	OTTMUST00000064137.2	2767	891aa	OTTMUSP00000031811	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52250	E9PYX1
Ush1c-004	OTTMUST00000064138.1	2047	548aa	OTTMUSP00000031812	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39963	A0A0R4J0Z8
Ush1c-008	OTTMUST00000110765.1	1865	517aa	OTTMUSP00000061846	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BIZ2
Ush1c-007	OTTMUST00000110764.1	1696	529aa	OTTMUSP00000061845	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BLC4
Ush1c-002	OTTMUST00000064136.2	3036	859aa	OTTMUSP00000031810	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RIM8
Ush1c-005	OTTMUST00000064139.2	395	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ush1c-006	OTTMUST00000064140.3	708	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 27 Transcript length: 3,072 bps Translation length: 910 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21276

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 27/10/2015 (Created on 18/06/2007)

Alternative symbols

AC120135.1-001

Remarks

NAGNAG splice site

NP_710143.2

Other assemblies

This transcript maps to 46,195,357-46,238,503 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000009667

Curation Method

Manual annotation from Havana