Transcript: Capn10-001 OTTMUST00000065210.1

Description

calpain 10

Location

Chromosome 1: 92,934,376-92,947,941 forward strand.

About this transcript

This transcript has 12 exons and is annotated with 25 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000026368 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Capn10-001	OTTMUST00000065210.1	2902	666aa	OTTMUSP00000032463	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS15181	Q9ESK3
Capn10-002	OTTMUST00000065211.1	1268	264aa	OTTMUSP00000032464	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q9CPY2
Capn10-003	OTTMUST00000065212.1	2171	507aa	OTTMUSP00000032465	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RGR0
Capn10-007	OTTMUST00000124552.1	752	179aa	OTTMUSP00000067742	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A087WSM6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Capn10-005	OTTMUST00000065214.1	317	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Capn10-004	OTTMUST00000065213.1	829	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Capn10-006	OTTMUST00000065215.1	458	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 2,902 bps Translation length: 666 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS15181

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 03/07/2007)

Alternative symbols

AC119846.1-001

Other assemblies

This transcript maps to 92,934,376-92,947,941 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000027488

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Capn10-001 OTTMUST00000065210.1

Summary

Transcript-based displays