Transcript: Syt9-001 OTTMUST00000077942.1

Description

synaptotagmin IX

Location

About this transcript

This transcript has 7 exons and is annotated with 22 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Syt9-001	OTTMUST00000077942.1	3817	491aa	OTTMUSP00000041329	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40078	Q9R0N9
Syt9-003	OTTMUST00000077944.2	482	69aa	OTTMUSP00000041331	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YVX0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Syt9-002	OTTMUST00000077943.1	3267	186aa	OTTMUSP00000041330	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RGS5
Syt9-004	OTTMUST00000077945.1	2536	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Syt9-005	OTTMUST00000077946.1	2497	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 3,817 bps Translation length: 491 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40078

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 30/09/2015 (Created on 15/02/2008)

Alternative symbols

AC164638.1-001

Other assemblies

This transcript maps to 107,370,790-107,548,656 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000073459

Curation Method

Manual annotation from Havana