Transcript: Slc22a23-001 OTTMUST00000085272.1

Description

solute carrier family 22, member 23

Location

About this transcript

This transcript has 11 exons and is annotated with 24 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Slc22a23-001	OTTMUST00000085272.1	6251	689aa	OTTMUSP00000046051	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS26446	Q3UHH2
Slc22a23-002	OTTMUST00000085274.1	5011	566aa	OTTMUSP00000046053	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7BP73	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Slc22a23-003	OTTMUST00000085275.1	4103	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Slc22a23-004	OTTMUST00000085276.1	786	182aa	OTTMUSP00000046054	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Slc22a23-005	OTTMUST00000085277.1	503	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Slc22a23-006	OTTMUST00000085278.1	707	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 6,251 bps Translation length: 689 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26446

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 19/07/2012 (Created on 11/11/2008)

Alternative symbols

RP23-435I6.2-001

Other assemblies

This transcript maps to 34,179,158-34,345,182 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000040336

Curation Method

Manual annotation from Havana