Transcript: Hyou1-003 OTTMUST00000086718.1

Description

hypoxia up-regulated 1

Location

Chromosome 9: 44,379,623-44,391,102 forward strand.

About this transcript

This transcript has 26 exons and is annotated with 34 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000034194 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Hyou1-002	OTTMUST00000086717.1	4489	999aa	OTTMUSP00000046970	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23107	Q9JKR6
Hyou1-001	OTTMUST00000086716.1	4432	999aa	OTTMUSP00000046969	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23107	Q9JKR6
Hyou1-003	OTTMUST00000086718.1	3374	999aa	OTTMUSP00000046971	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23107	Q9JKR6
Hyou1-007	OTTMUST00000086722.2	681	227aa	OTTMUSP00000046973	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Hyou1-009	OTTMUST00000154098.1	561	153aa	OTTMUSP00000079699	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Hyou1-006	OTTMUST00000086721.1	2500	172aa	OTTMUSP00000046972	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Hyou1-004	OTTMUST00000086719.1	4925	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hyou1-005	OTTMUST00000086720.1	2015	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hyou1-008	OTTMUST00000086723.1	550	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 26 Transcript length: 3,374 bps Translation length: 999 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS23107

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/06/2016 (Created on 25/02/2009)

Alternative symbols

RP24-175C20.2-003

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 44,379,623-44,391,102 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000160902

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Hyou1-003 OTTMUST00000086718.1

Summary

Transcript-based displays