Transcript: Hmgn3-006 OTTMUST00000088419.3

Description

high mobility group nucleosomal binding domain 3

Location

Chromosome 9: 83,109,948-83,146,470 reverse strand.

About this transcript

This transcript has 7 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000034786 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Hmgn3-001	OTTMUST00000088414.1	983	99aa	OTTMUSP00000048179	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52872	Q9DCB1
Hmgn3-002	OTTMUST00000088415.2	862	77aa	OTTMUSP00000048180	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52873	-
Hmgn3-003	OTTMUST00000088416.1	1391	95aa	OTTMUSP00000048181	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Hmgn3-006	OTTMUST00000088419.3	855	128aa	OTTMUSP00000065951	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WSB8
Hmgn3-004	OTTMUST00000088417.1	546	95aa	OTTMUSP00000048182	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Hmgn3-007	OTTMUST00000088420.1	533	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Hmgn3-005	OTTMUST00000088418.1	671	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hmgn3-009	OTTMUST00000118228.1	560	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hmgn3-008	OTTMUST00000088421.1	256	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 855 bps Translation length: 128 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 24/07/2013 (Created on 17/07/2009)

Alternative symbols

RP23-13G1.1-006

Annotation Attributes

not organism-supported [Definitions]

Other assemblies

This transcript maps to 83,109,948-83,146,470 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000187193

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Hmgn3-006 OTTMUST00000088419.3

Summary

Transcript-based displays