Transcript: Pnpla2-001 OTTMUST00000090404.3

Description

patatin-like phospholipase domain containing 2

Location

Chromosome 7: 141,455,198-141,460,743 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000035378 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pnpla2-001	OTTMUST00000090404.3	2625	486aa	OTTMUSP00000049587	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52445	Q8BJ56
Pnpla2-005	OTTMUST00000090408.1	1799	430aa	OTTMUSP00000049590	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22015	-
Pnpla2-006	OTTMUST00000090478.2	985	305aa	OTTMUSP00000049658	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PZA4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pnpla2-007	OTTMUST00000090491.2	504	158aa	OTTMUSP00000049665	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q323	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pnpla2-002	OTTMUST00000090405.3	2048	70aa	OTTMUSP00000049588	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9Q4A0
Pnpla2-003	OTTMUST00000090406.4	1957	70aa	OTTMUSP00000049589	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9Q4A0
Pnpla2-008	OTTMUST00000090492.2	920	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 2,625 bps Translation length: 486 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS52445

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 26/10/2015 (Created on 15/02/2010)

Alternative symbols

RP23-134L4.1-001

Other assemblies

This transcript maps to 141,455,198-141,460,743 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000164016

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Pnpla2-001 OTTMUST00000090404.3

Summary

Transcript-based displays