Transcript: Galnt1-001 OTTMUST00000092647.1

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1

Location

Chromosome 18: 24,205,344-24,286,818 forward strand.

About this transcript

This transcript has 13 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000036067 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Galnt1-002	OTTMUST00000092648.1	4108	559aa	OTTMUSP00000051262	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29100	O08912
Galnt1-001	OTTMUST00000092647.1	3977	559aa	OTTMUSP00000051261	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29100	O08912
Galnt1-003	OTTMUST00000092649.2	980	142aa	OTTMUSP00000051263	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q0U0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Galnt1-007	OTTMUST00000093531.1	720	78aa	OTTMUSP00000051912	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Galnt1-006	OTTMUST00000093530.1	678	62aa	OTTMUSP00000051911	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9PVK6
Galnt1-005	OTTMUST00000092650.1	818	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Galnt1-004	OTTMUST00000092651.1	798	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 13 Transcript length: 3,977 bps Translation length: 559 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29100

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 26/05/2010)

Alternative symbols

RP23-291B16.1-001

Remarks

NP_038842.2

Other assemblies

This transcript maps to 24,205,344-24,286,818 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000000430

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Galnt1-001 OTTMUST00000092647.1

Summary

Transcript-based displays