Transcript: Arid3b-001 OTTMUST00000094427.3

Description

AT rich interactive domain 3B (BRIGHT-like)

Location

Chromosome 9: 57,790,356-57,836,708 reverse strand.

About this transcript

This transcript has 9 exons and is annotated with 14 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000036791 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Arid3b-001	OTTMUST00000094427.3	4171	568aa	OTTMUSP00000052509	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23233	Q9Z1N7
Arid3b-002	OTTMUST00000094430.1	1969	536aa	OTTMUSP00000052512	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8WIN2
Arid3b-006	OTTMUST00000094426.1	1259	240aa	OTTMUSP00000052508	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PW42
Arid3b-009	OTTMUST00000094433.1	640	94aa	OTTMUSP00000052513	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Arid3b-007	OTTMUST00000094434.2	367	35aa	OTTMUSP00000052514	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Arid3b-003	OTTMUST00000094429.1	3119	287aa	OTTMUSP00000052511	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Arid3b-005	OTTMUST00000094428.2	1944	212aa	OTTMUSP00000052510	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Arid3b-008	OTTMUST00000094432.1	327	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Arid3b-004	OTTMUST00000094431.1	3057	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 4,171 bps Translation length: 568 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS23233

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/03/2012 (Created on 26/08/2010)

Alternative symbols

RP24-539A10.1-001

Remarks

CCDS23233.1

D430018O21Rik

NP_062663

Other assemblies

This transcript maps to 57,790,356-57,836,708 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000171444

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Arid3b-001 OTTMUST00000094427.3

Summary

Transcript-based displays