Transcript: Scnn1a-001 OTTMUST00000099477.2

Description

sodium channel, nonvoltage-gated 1 alpha

Location

About this transcript

This transcript has 12 exons and is annotated with 28 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Scnn1a-001	OTTMUST00000099477.2	3499	700aa	OTTMUSP00000055834	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39641	Q3USG4
Scnn1a-003	OTTMUST00000100326.1	3494	674aa	OTTMUSP00000056232	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BJC3
Scnn1a-002	OTTMUST00000100325.1	3354	593aa	OTTMUSP00000056231	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BLI2
Scnn1a-004	OTTMUST00000100330.1	2807	674aa	OTTMUSP00000056236	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BJC3
Scnn1a-005	OTTMUST00000100329.2	2323	591aa	OTTMUSP00000056235	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BKC4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Scnn1a-006	OTTMUST00000100327.2	560	143aa	OTTMUSP00000056233	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BKP2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Scnn1a-007	OTTMUST00000100328.1	2154	275aa	OTTMUSP00000056234	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H3BKW1

Summary

Statistics

Exons: 12 Transcript length: 3,499 bps Translation length: 700 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39641

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 24/03/2015 (Created on 18/05/2011)

Alternative symbols

RP23-402K14.7-001

Remarks

NP_035454.2

Other assemblies

This transcript maps to 125,321,340-125,344,943 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000081440

Curation Method

Manual annotation from Havana