Transcript: Sik2-001 OTTMUST00000110259.3

Description

salt inducible kinase 2

Location

Chromosome 9: 50,892,801-51,009,073 reverse strand.

About this transcript

This transcript has 16 exons and is annotated with 18 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000042049 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Sik2-001	OTTMUST00000110259.3	3552	931aa	OTTMUSP00000061475	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40627	F8VPT7
Sik2-006	OTTMUST00000110290.2	5369	927aa	OTTMUSP00000061499	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BJC9
Sik2-007	OTTMUST00000110291.2	4107	929aa	OTTMUSP00000061500	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BKG1
Sik2-002	OTTMUST00000110258.2	3576	929aa	OTTMUSP00000061474	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H3BKG1
Sik2-003	OTTMUST00000110261.1	2991	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Sik2-004	OTTMUST00000110260.2	654	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Sik2-005	OTTMUST00000110262.1	2183	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sik2-008	OTTMUST00000110298.1	476	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 3,552 bps Translation length: 931 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40627

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/03/2012 (Created on 20/07/2011)

Alternative symbols

RP23-106O8.2-001

Other assemblies

This transcript maps to 50,892,801-51,009,073 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000041375

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Sik2-001 OTTMUST00000110259.3

Summary

Transcript-based displays