Transcript: Pdlim1-001 OTTMUST00000113837.1

Description

PDZ and LIM domain 1 (elfin)

Location

About this transcript

This transcript has 7 exons and is annotated with 16 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pdlim1-001	OTTMUST00000113837.1	2571	327aa	OTTMUSP00000063593	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS37977	O70400
Pdlim1-003	OTTMUST00000113840.2	692	198aa	OTTMUSP00000063594	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	S4R1V0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pdlim1-002	OTTMUST00000113841.1	2835	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pdlim1-005	OTTMUST00000113838.1	715	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pdlim1-004	OTTMUST00000113839.1	666	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 2,571 bps Translation length: 327 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37977

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 24/10/2012 (Created on 24/10/2012)

Alternative symbols

RP23-320B10.1-001

Other assemblies

This transcript maps to 40,221,173-40,271,616 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000068439

Curation Method

Manual annotation from Havana