Transcript: Pigb-001 OTTMUST00000117838.1

Description

phosphatidylinositol glycan anchor biosynthesis, class B

Location

Chromosome 9: 73,007,419-73,040,378 reverse strand.

About this transcript

This transcript has 13 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000044840 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pigb-003	OTTMUST00000117839.1	3221	542aa	OTTMUSP00000065838	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40687	Q9JJQ0
Pigb-002	OTTMUST00000117840.1	2079	542aa	OTTMUSP00000065839	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40687	Q9JJQ0
Pigb-001	OTTMUST00000117838.1	6838	542aa	OTTMUSP00000065837	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS40687	Q9JJQ0
Pigb-005	OTTMUST00000117841.1	664	154aa	OTTMUSP00000065840	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Pigb-006	OTTMUST00000117843.1	1788	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pigb-007	OTTMUST00000117888.1	1594	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pigb-004	OTTMUST00000117842.1	694	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 6,838 bps Translation length: 542 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40687

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/06/2013 (Created on 24/06/2013)

Alternative symbols

RP24-176F12.7-001

Remarks

non canonical conserved

Other assemblies

This transcript maps to 73,007,419-73,040,378 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000183746

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Pigb-001 OTTMUST00000117838.1

Summary

Transcript-based displays