Transcript: Smg7-003 OTTMUST00000126592.1

Description

Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)

Location

About this transcript

This transcript has 23 exons and is annotated with 20 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Smg7-003	OTTMUST00000126592.1	5792	1146aa	OTTMUSP00000068435	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48394	-
Smg7-002	OTTMUST00000126591.1	5767	1134aa	OTTMUSP00000068434	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35740	-
Smg7-001	OTTMUST00000126593.1	3928	1138aa	OTTMUSP00000068436	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48395	Q5RJH6
Smg7-005	OTTMUST00000126595.1	672	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Smg7-004	OTTMUST00000126594.1	574	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Smg7-006	OTTMUST00000126596.1	525	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 23 Transcript length: 5,792 bps Translation length: 1,146 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS48394

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 07/04/2014 (Created on 07/04/2014)

Alternative symbols

RP23-434L2.3-003

Remarks

NP_001153729.1

Other assemblies

This transcript maps to 152,836,996-152,878,168 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000043560

Curation Method

Manual annotation from Havana