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Description

Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)

Location
About this transcript

This transcript has 22 exons and is annotated with 21 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Smg5-001OTTMUST00000131031.144481017aaOTTMUSP00000070126
 
Protein coding
CCDS38480Q6ZPY2
Smg5-008OTTMUST00000131035.11010180aaOTTMUSP00000070127
 
Nonsense mediated decay
--CDS 5' incomplete
Smg5-004OTTMUST00000131038.1833No protein-
 
Processed transcript
--
Smg5-007OTTMUST00000131034.1778No protein-
 
Processed transcript
--
Smg5-002OTTMUST00000131032.13119No protein-
 
Retained intron
--
Smg5-009OTTMUST00000131036.1830No protein-
 
Retained intron
--
Smg5-005OTTMUST00000131037.1769No protein-
 
Retained intron
--
Smg5-006OTTMUST00000131033.1751No protein-
 
Retained intron
--
Smg5-003OTTMUST00000131039.1424No protein-
 
Retained intron
--
Statistics

Exons: 22 Transcript length: 4,448 bps Translation length: 1,017 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38480

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 06/08/2014 (Created on 30/07/2014)

Alternative symbols

RP23-168E14.11-001

Other assemblies

This transcript maps to 88,336,260-88,362,338 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays