Transcript: Tsc22d2-001 OTTMUST00000131807.3

Description

TSC22 domain family, member 2

Location

About this transcript

This transcript has 4 exons and is annotated with 18 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Tsc22d2-001	OTTMUST00000131807.3	9799	769aa	OTTMUSP00000070404	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38435	E9Q7M2
Tsc22d2-002	OTTMUST00000131875.1	4659	745aa	OTTMUSP00000070427	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JFZ4
Tsc22d2-005	OTTMUST00000131877.1	2150	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Tsc22d2-006	OTTMUST00000131886.1	723	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Tsc22d2-003	OTTMUST00000131876.1	715	81aa	OTTMUSP00000070428	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0G2JFL0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Tsc22d2-004	OTTMUST00000131878.1	3022	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 9,799 bps Translation length: 769 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38435

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 22/01/2015 (Created on 12/08/2014)

Alternative symbols

RP23-413C3.2-001

Remarks

NP_001074698.1

Other assemblies

This transcript maps to 58,414,715-58,466,783 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000099090

Curation Method

Manual annotation from Havana