Transcript: Asic3-002 OTTMUST00000133653.2

Description

acid-sensing (proton-gated) ion channel 3

Location

About this transcript

This transcript has 11 exons and is annotated with 20 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Asic3-001	OTTMUST00000133651.1	1853	440aa	OTTMUSP00000071004	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS80225	-
Asic3-002	OTTMUST00000133653.2	1593	530aa	OTTMUSP00000071005	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51433	Q6X1Y6
Asic3-005	OTTMUST00000133655.1	537	70aa	OTTMUSP00000071006	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0G2JE16	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Asic3-003	OTTMUST00000133652.1	2211	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Asic3-004	OTTMUST00000133654.1	1029	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 1,593 bps Translation length: 530 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51433

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 15/09/2014)

Alternative symbols

RP23-251M20.1-002

Other assemblies

This transcript maps to 24,413,712-24,417,746 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000196296

Curation Method

Manual annotation from Havana