Transcript: Snx8-001 OTTMUST00000135829.1

Description

sorting nexin 8

Location

About this transcript

This transcript has 11 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Snx8-001	OTTMUST00000135829.1	2627	459aa	OTTMUSP00000071805	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39356	Q8CFD4
Snx8-003	OTTMUST00000135828.1	2547	411aa	OTTMUSP00000071804	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q3U0I9
Snx8-002	OTTMUST00000135830.1	1914	411aa	OTTMUSP00000071806	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q3U0I9
Snx8-004	OTTMUST00000135832.2	687	176aa	OTTMUSP00000071807	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JEQ9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Snx8-007	OTTMUST00000135833.2	493	75aa	OTTMUSP00000071808	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JDT3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Snx8-005	OTTMUST00000135827.1	2590	88aa	OTTMUSP00000071803	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0G2JDJ6
Snx8-006	OTTMUST00000135831.1	522	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 2,627 bps Translation length: 459 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39356

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 03/11/2014 (Created on 03/11/2014)

Alternative symbols

RP23-307I19.3-001

Other assemblies

This transcript maps to 140,340,303-140,389,262 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000031539

Curation Method

Manual annotation from Havana