Transcript: Cct6a-001 OTTMUST00000137670.1

Description

chaperonin containing Tcp1, subunit 6a (zeta)

Location

Chromosome 5: 129,786,998-129,846,371 forward strand.

About this transcript

This transcript has 13 exons.

Gene

This transcript is a product of gene OTTMUSG00000055628 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS
Cct6a-001	OTTMUST00000137670.1	2454	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
Cct6a-005	OTTMUST00000137674.1	424	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
Cct6a-006	OTTMUST00000137675.1	411	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
Cct6a-002	OTTMUST00000137671.1	800	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
Cct6a-004	OTTMUST00000137673.1	701	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
Cct6a-003	OTTMUST00000137672.1	460	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 13 Transcript length: 2,454 bps

Class

processed transcript [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 06/01/2015 (Created on 06/01/2015)

Alternative symbols

CAAA01063609.1-001

Remarks

missing around 135 nts between the 10th and the 11th exon; this missing part (missing intron and most likely missing exon) lies at the genomic gap between clones CAAA01063609.1 and CAAA01206539.1; covered by GRC_ISSUES_M38 (MG-3600). Currently here annotated as a transcript biotype, rather than an NMD, as the sequence of supporting transcripts is complete and it is the genome sequence that is missing. - gdr 05/01/2015

sequence error

Other assemblies

This transcript maps to 129,786,998-129,846,371 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000201414

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Cct6a-001 OTTMUST00000137670.1

Summary

Transcript-based displays