Transcript: Plxna1-001 OTTMUST00000141713.1

Description

plexin A1

Location

About this transcript

This transcript has 32 exons and is annotated with 45 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Plxna1-001	OTTMUST00000141713.1	9034	1894aa	OTTMUSP00000074003	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20344	P70206
Plxna1-004	OTTMUST00000141715.1	678	16aa	OTTMUSP00000074004	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N4SUU1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Plxna1-002	OTTMUST00000141717.1	459	59aa	OTTMUSP00000074005	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N4SW74	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Plxna1-003	OTTMUST00000141716.1	735	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Plxna1-005	OTTMUST00000141714.1	372	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 32 Transcript length: 9,034 bps Translation length: 1,894 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20344

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 19/05/2015 (Created on 19/05/2015)

Alternative symbols

RP24-226D9.5-001

Remarks

upstream uORF

Other assemblies

This transcript maps to 89,316,314-89,362,620 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000163139

Curation Method

Manual annotation from Havana