Transcript: Grik5-001 OTTMUST00000143045.1

Description

glutamate receptor, ionotropic, kainate 5 (gamma 2)

Location

Chromosome 7: 25,009,849-25,072,292 reverse strand.

About this transcript

This transcript has 20 exons and is annotated with 30 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000058241 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Grik5-001	OTTMUST00000143045.1	3763	979aa	OTTMUSP00000074594	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20970	Q61626
Grik5-003	OTTMUST00000143046.1	4061	270aa	OTTMUSP00000074595	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RQ33
Grik5-002	OTTMUST00000143044.2	3597	130aa	OTTMUSP00000074593	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Grik5-004	OTTMUST00000143050.1	455	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Grik5-007	OTTMUST00000143047.1	880	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Grik5-005	OTTMUST00000143048.1	818	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Grik5-006	OTTMUST00000143049.1	600	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 20 Transcript length: 3,763 bps Translation length: 979 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20970

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 29/06/2015 (Created on 29/06/2015)

Alternative symbols

RP24-113D21.3-001

Other assemblies

This transcript maps to 25,009,849-25,072,292 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000003468

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Grik5-001 OTTMUST00000143045.1

Summary

Transcript-based displays