Transcript: Ddx39-006 OTTMUST00000150316.1

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 39

Location

About this transcript

This transcript has 12 exons and is annotated with 13 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Ddx39-002	OTTMUST00000064231.1	1794	427aa	OTTMUSP00000031869	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22460	Q8VDW0
Ddx39-001	OTTMUST00000064230.1	1656	427aa	OTTMUSP00000031868	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22460	Q8VDW0
Ddx39-006	OTTMUST00000150316.1	3836	427aa	OTTMUSP00000077937	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS22460	Q8VDW0
Ddx39-003	OTTMUST00000064232.1	1551	208aa	OTTMUSP00000031870	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RHT5
Ddx39-004	OTTMUST00000064233.1	1927	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ddx39-005	OTTMUST00000064234.1	754	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 3,836 bps Translation length: 427 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS22460

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/01/2016 (Created on 28/01/2016)

Alternative symbols

AC164432.4-006

Other assemblies

This transcript maps to 83,715,272-83,726,892 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000212949

Curation Method

Manual annotation from Havana