Description
exosome component 1
Synonyms
Ski4p, Csl4p, CSL4, CGI-108, p13, hCsl4p, SKI4
Location
Chromosome 10: 97,431,278-97,446,017 reverse strand.
VEGA68:CM000672.2
About this gene
This gene has 12 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| EXOSC1-001 | OTTHUMT00000049680.1 | 923 | 195aa | OTTHUMP00000020203 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7459 | Q9Y3B2 | |
| EXOSC1-008 | OTTHUMT00000049687.1 | 718 | 170aa | OTTHUMP00000020205 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81492 | B1AMU3 | |
| EXOSC1-009 | OTTHUMT00000049688.2 | 741 | 178aa | OTTHUMP00000020206 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B1AMU4 | |
| EXOSC1-011 | OTTHUMT00000049690.3 | 564 | 139aa | OTTHUMP00000272259 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | R4GNH9 | |
| EXOSC1-004 | OTTHUMT00000049683.2 | 536 | 165aa | OTTHUMP00000020204 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| EXOSC1-005 | OTTHUMT00000049684.2 | 480 | 143aa | OTTHUMP00000272260 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | R4GMQ7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| EXOSC1-002 | OTTHUMT00000049681.3 | 1552 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| EXOSC1-012 | OTTHUMT00000049691.2 | 642 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| EXOSC1-010 | OTTHUMT00000049689.1 | 451 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| EXOSC1-013 | OTTHUMT00000049692.1 | 260 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| EXOSC1-003 | OTTHUMT00000049682.1 | 2113 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| EXOSC1-006 | OTTHUMT00000049685.1 | 739 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
