Description
sperm specific antigen 2
Synonyms
KIAA1927, SPAG13, CS-1, KRAP
Location
Chromosome 2: 181,891,833-181,930,738 forward strand.
VEGA68:CM000664.2
About this gene
This gene has 16 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SSFA2-001 | OTTHUMT00000255793.2 | 5150 | 1259aa | OTTHUMP00000163405 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46467 | P28290 | |
| SSFA2-004 | OTTHUMT00000334799.1 | 4987 | 1237aa | OTTHUMP00000205486 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS74611 | E9PHV5 | |
| SSFA2-002 | OTTHUMT00000255794.1 | 4965 | 1256aa | OTTHUMP00000163406 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2284 | - | |
| SSFA2-009 | OTTHUMT00000334804.1 | 3610 | 768aa | OTTHUMP00000205489 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EUL7 | |
| SSFA2-017 | OTTHUMT00000336380.1 | 747 | 201aa | OTTHUMP00000206308 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7BZ26 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SSFA2-010 | OTTHUMT00000334805.1 | 3148 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SSFA2-006 | OTTHUMT00000334801.2 | 5420 | 46aa | OTTHUMP00000206309 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SSFA2-007 | OTTHUMT00000334802.1 | 5067 | 46aa | OTTHUMP00000205488 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SSFA2-005 | OTTHUMT00000334800.1 | 3772 | 46aa | OTTHUMP00000205487 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SSFA2-013 | OTTHUMT00000334851.1 | 860 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SSFA2-012 | OTTHUMT00000334850.2 | 718 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SSFA2-011 | OTTHUMT00000334849.1 | 269 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SSFA2-014 | OTTHUMT00000336377.1 | 219 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SSFA2-008 | OTTHUMT00000334803.1 | 6473 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SSFA2-003 | OTTHUMT00000334798.1 | 2526 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SSFA2-015 | OTTHUMT00000336378.1 | 578 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
