Description
stromal cell-derived factor 2
Location
Chromosome 17: 28,648,356-28,662,189 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 10 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SDF2-001 | OTTHUMT00000255965.2 | 1568 | 211aa | OTTHUMP00000163531 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11238 | Q99470 | |
| SDF2-008 | OTTHUMT00000446418.2 | 444 | 50aa | OTTHUMP00000264374 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SDF2-009 | OTTHUMT00000448529.1 | 735 | 104aa | OTTHUMP00000262735 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | K7ELI9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SDF2-003 | OTTHUMT00000255967.1 | 1025 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SDF2-002 | OTTHUMT00000255966.2 | 924 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SDF2-004 | OTTHUMT00000255968.1 | 823 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SDF2-007 | OTTHUMT00000446419.1 | 775 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SDF2-010 | OTTHUMT00000473010.1 | 681 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SDF2-005 | OTTHUMT00000446421.2 | 583 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SDF2-006 | OTTHUMT00000446420.1 | 1342 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
