Description
gasdermin B
Synonyms
PRO2521
Location
Chromosome 17: 39,904,595-39,921,060 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 16 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | Flags |
|---|---|---|---|---|---|---|---|
| GSDMB-001 | OTTHUMT00000256993.1 | 1626 | 394aa | OTTHUMP00000164329 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11354 | |
| GSDMB-010 | OTTHUMT00000380438.1 | 1546 | 407aa | OTTHUMP00000227622 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54119 | |
| GSDMB-002 | OTTHUMT00000256994.1 | 1500 | 403aa | OTTHUMP00000164330 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42313 | |
| GSDMB-003 | OTTHUMT00000256995.2 | 1468 | 416aa | OTTHUMP00000164331 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54120 | |
| GSDMB-005 | OTTHUMT00000256997.1 | 5535 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | |
| GSDMB-015 | OTTHUMT00000446835.1 | 1963 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | |
| GSDMB-004 | OTTHUMT00000256996.2 | 1476 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | |
| GSDMB-011 | OTTHUMT00000380439.2 | 1127 | 200aa | OTTHUMP00000227623 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | |
| GSDMB-013 | OTTHUMT00000380441.1 | 1100 | 203aa | OTTHUMP00000227625 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | |
| GSDMB-012 | OTTHUMT00000380440.1 | 958 | 183aa | OTTHUMP00000227624 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | |
| GSDMB-008 | OTTHUMT00000257000.2 | 369 | 74aa | OTTHUMP00000262358 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| GSDMB-016 | OTTHUMT00000467351.1 | 4655 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | |
| GSDMB-007 | OTTHUMT00000256999.1 | 2209 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | |
| GSDMB-006 | OTTHUMT00000256998.1 | 710 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | |
| GSDMB-014 | OTTHUMT00000380442.1 | 616 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | |
| GSDMB-009 | OTTHUMT00000257001.1 | 318 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - |
