Description
transmembrane 6 superfamily member 1
Location
Chromosome 15: 83,107,407-83,144,854 forward strand.
VEGA68:CM000677.2
About this gene
This gene has 9 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
TM6SF1-001 | OTTHUMT00000304009.1 | 2074 | 370aa | OTTHUMP00000190873 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10323 | Q9BZW5 | |
TM6SF1-006 | OTTHUMT00000419710.1 | 1638 | 188aa | OTTHUMP00000248977 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81915 | Q6P4D7 | |
TM6SF1-005 | OTTHUMT00000419714.2 | 1020 | 339aa | OTTHUMP00000248979 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45338 | E9PD04 | |
TM6SF1-009 | OTTHUMT00000419783.2 | 856 | 166aa | OTTHUMP00000249010 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BM84 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
TM6SF1-010 | OTTHUMT00000419786.1 | 407 | 30aa | OTTHUMP00000249012 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
TM6SF1-002 | OTTHUMT00000419711.1 | 1641 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
TM6SF1-003 | OTTHUMT00000419712.2 | 1808 | 133aa | OTTHUMP00000256130 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PD04 | |
TM6SF1-004 | OTTHUMT00000419713.1 | 1469 | 145aa | OTTHUMP00000248978 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | Q8N5N8 | |
TM6SF1-008 | OTTHUMT00000419781.1 | 548 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - |