Description
SR-related CTD-associated factor 11
Synonyms
CASP11, SRRP129, SIP1
Location
Chromosome 12: 45,919,131-45,992,120 reverse strand.
VEGA68:CM000674.2
About this gene
This gene has 15 transcripts (splice variants), 3 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SCAF11-001 | OTTHUMT00000313992.3 | 7543 | 1463aa | OTTHUMP00000195169 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8748 | Q99590 | |
| SCAF11-004 | OTTHUMT00000313995.3 | 5296 | 1148aa | OTTHUMP00000241203 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q99590 | |
| SCAF11-009 | OTTHUMT00000404210.2 | 3934 | 1271aa | OTTHUMP00000241204 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VXG7 | |
| SCAF11-002 | OTTHUMT00000313993.3 | 2084 | 117aa | OTTHUMP00000195170 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8W6K1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SCAF11-003 | OTTHUMT00000313994.2 | 1931 | 77aa | OTTHUMP00000195171 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A8MUK0 | |
| SCAF11-005 | OTTHUMT00000313996.2 | 1336 | 77aa | OTTHUMP00000195172 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A8MTP4 | |
| SCAF11-012 | OTTHUMT00000404211.2 | 507 | 152aa | OTTHUMP00000275117 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCAF11-014 | OTTHUMT00000404215.2 | 324 | 71aa | OTTHUMP00000275174 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCAF11-008 | OTTHUMT00000404213.3 | 3271 | 935aa | OTTHUMP00000241205 | Non stop decay | - | - | |
| SCAF11-010 | OTTHUMT00000404209.1 | 579 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SCAF11-007 | OTTHUMT00000313998.1 | 562 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SCAF11-011 | OTTHUMT00000404208.1 | 416 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SCAF11-006 | OTTHUMT00000313997.1 | 757 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCAF11-015 | OTTHUMT00000404214.1 | 705 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCAF11-013 | OTTHUMT00000404212.1 | 697 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
