Description
symplekin
Synonyms
SPK, SYM
Location
Chromosome 19: 45,815,410-45,863,290 reverse strand.
VEGA68:CM000681.2
About this gene
This gene has 21 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SYMPK-001 | OTTHUMT00000316581.1 | 4195 | 1274aa | OTTHUMP00000196465 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12676 | Q92797 | |
| SYMPK-008 | OTTHUMT00000461669.2 | 6537 | 1058aa | OTTHUMP00000274683 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SYMPK-005 | OTTHUMT00000461668.2 | 5449 | 1058aa | OTTHUMP00000274682 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SYMPK-011 | OTTHUMT00000461677.2 | 623 | 115aa | OTTHUMP00000269432 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SYMPK-012 | OTTHUMT00000461676.2 | 611 | 137aa | OTTHUMP00000269431 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SYMPK-014 | OTTHUMT00000461679.2 | 560 | 50aa | OTTHUMP00000269433 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SYMPK-021 | OTTHUMT00000461675.1 | 503 | 142aa | OTTHUMP00000269430 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SYMPK-007 | OTTHUMT00000461664.2 | 6345 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SYMPK-002 | OTTHUMT00000461662.1 | 2326 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SYMPK-010 | OTTHUMT00000461670.1 | 530 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SYMPK-006 | OTTHUMT00000461663.1 | 5164 | 673aa | OTTHUMP00000269428 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SYMPK-019 | OTTHUMT00000461666.1 | 653 | 95aa | OTTHUMP00000269429 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SYMPK-009 | OTTHUMT00000461660.1 | 1603 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SYMPK-016 | OTTHUMT00000461674.1 | 592 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SYMPK-015 | OTTHUMT00000461672.1 | 558 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SYMPK-003 | OTTHUMT00000461661.1 | 5107 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SYMPK-004 | OTTHUMT00000461671.1 | 1899 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SYMPK-018 | OTTHUMT00000461667.1 | 1000 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SYMPK-020 | OTTHUMT00000461665.1 | 995 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SYMPK-013 | OTTHUMT00000461678.1 | 546 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SYMPK-017 | OTTHUMT00000461673.1 | 544 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
