Description
cancer susceptibility candidate 1
Synonyms
FLJ10921, PPP1R54, LAS1
Location
Chromosome 12: 25,108,420-25,195,162 reverse strand.
VEGA68:CM000674.2
About this gene
This gene has 14 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | Flags |
|---|---|---|---|---|---|---|---|
| CASC1-004 | OTTHUMT00000316764.1 | 2445 | 690aa | OTTHUMP00000196572 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41763 | |
| CASC1-002 | OTTHUMT00000316762.1 | 2417 | 676aa | OTTHUMP00000196570 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55810 | |
| CASC1-003 | OTTHUMT00000316763.1 | 2363 | 722aa | OTTHUMP00000196571 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31759 | |
| CASC1-001 | OTTHUMT00000316761.1 | 2361 | 716aa | OTTHUMP00000196569 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41762 | |
| CASC1-009 | OTTHUMT00000412185.1 | 2146 | 657aa | OTTHUMP00000245369 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55811 | |
| CASC1-010 | OTTHUMT00000412184.2 | 1774 | 548aa | OTTHUMP00000245368 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CASC1-013 | OTTHUMT00000412203.2 | 583 | 92aa | OTTHUMP00000245377 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CASC1-006 | OTTHUMT00000412107.1 | 1558 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | |
| CASC1-005 | OTTHUMT00000412106.1 | 2208 | 35aa | OTTHUMP00000245335 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | |
| CASC1-011 | OTTHUMT00000412187.1 | 563 | 45aa | OTTHUMP00000245370 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | |
| CASC1-008 | OTTHUMT00000412186.1 | 1626 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | |
| CASC1-014 | OTTHUMT00000412202.1 | 403 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | |
| CASC1-012 | OTTHUMT00000412201.1 | 820 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | |
| CASC1-007 | OTTHUMT00000412108.1 | 467 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - |
