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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: SYN2 OTTHUMG00000155335

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Description

synapsin II

Synonyms

SYNIIa, SYNII, SYNIIb

Location

Chromosome 3: 12,004,402-12,191,400 forward strand.

VEGA68:CM000665.2

About this gene

This gene has 6 transcripts (splice variants), 5 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SYN2-002	OTTHUMT00000339528.5	3871	478aa	OTTHUMP00000275822	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS74901	A0A087X2E3
SYN2-001	OTTHUMT00000339526.9	2674	582aa	OTTHUMP00000275821	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS74900	A0A087WW96
SYN2-006	OTTHUMT00000339723.2	2356	221aa	OTTHUMP00000275823	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A087WW91	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SYN2-004	OTTHUMT00000339677.2	550	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SYN2-007	OTTHUMT00000339724.2	520	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SYN2-005	OTTHUMT00000339678.2	2128	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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