Description
PDZ domain containing ring finger 3
Synonyms
LNX3, KIAA1095, SEMACAP3
Location
Chromosome 3: 73,382,433-73,624,940 reverse strand.
VEGA68:CM000665.2
About this gene
This gene has 12 transcripts (splice variants), 4 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PDZRN3-001 | OTTHUMT00000352460.1 | 4248 | 1066aa | OTTHUMP00000213613 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS33789 | Q9UPQ7 | |
| PDZRN3-005 | OTTHUMT00000352464.4 | 2927 | 723aa | OTTHUMP00000213617 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS77770 | - | |
| PDZRN3-006 | OTTHUMT00000352465.1 | 2778 | 783aa | OTTHUMP00000213618 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS77771 | - | |
| PDZRN3-004 | OTTHUMT00000352463.1 | 2737 | 723aa | OTTHUMP00000213616 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS77770 | - | |
| PDZRN3-007 | OTTHUMT00000352466.1 | 2080 | 382aa | OTTHUMP00000213619 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PDZRN3-003 | OTTHUMT00000352462.2 | 1776 | 492aa | OTTHUMP00000213615 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PDZRN3-002 | OTTHUMT00000352461.1 | 1136 | 360aa | OTTHUMP00000213614 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PDZRN3-010 | OTTHUMT00000352469.1 | 645 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PDZRN3-008 | OTTHUMT00000352467.1 | 590 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PDZRN3-012 | OTTHUMT00000352471.1 | 757 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PDZRN3-009 | OTTHUMT00000352468.1 | 537 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PDZRN3-011 | OTTHUMT00000352470.1 | 406 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
