Description
calcium binding and coiled-coil domain 2
Synonyms
MGC17318, NDP52
Location
Chromosome 17: 48,830,988-48,866,522 forward strand.
VEGA68:CM000679.2
About this gene
This gene has 30 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CALCOCO2-001 | OTTHUMT00000360866.1 | 3682 | 446aa | OTTHUMP00000218344 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11538 | Q13137 | |
| CALCOCO2-008 | OTTHUMT00000360873.1 | 1916 | 470aa | OTTHUMP00000218349 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58559 | - | |
| CALCOCO2-004 | OTTHUMT00000360869.1 | 1512 | 467aa | OTTHUMP00000218347 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58558 | - | |
| CALCOCO2-003 | OTTHUMT00000360868.1 | 1438 | 404aa | OTTHUMP00000218346 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58560 | - | |
| CALCOCO2-002 | OTTHUMT00000360867.1 | 1396 | 374aa | OTTHUMP00000218345 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58561 | - | |
| CALCOCO2-011 | OTTHUMT00000360876.3 | 973 | 259aa | OTTHUMP00000218351 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6REB0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CALCOCO2-014 | OTTHUMT00000360879.2 | 767 | 27aa | OTTHUMP00000218352 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CALCOCO2-015 | OTTHUMT00000360880.2 | 724 | 193aa | OTTHUMP00000218353 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CALCOCO2-025 | OTTHUMT00000360890.1 | 561 | 129aa | OTTHUMP00000218356 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CALCOCO2-010 | OTTHUMT00000360875.2 | 558 | 168aa | OTTHUMP00000218350 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CALCOCO2-033 | OTTHUMT00000440738.2 | 553 | 121aa | OTTHUMP00000258625 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CALCOCO2-018 | OTTHUMT00000360883.2 | 495 | 154aa | OTTHUMP00000218355 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CALCOCO2-007 | OTTHUMT00000360872.2 | 2038 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CALCOCO2-006 | OTTHUMT00000360871.2 | 1806 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CALCOCO2-026 | OTTHUMT00000360891.2 | 578 | 43aa | OTTHUMP00000225418 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CALCOCO2-031 | OTTHUMT00000440739.1 | 575 | 108aa | OTTHUMP00000258626 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CALCOCO2-027 | OTTHUMT00000360892.1 | 674 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CALCOCO2-012 | OTTHUMT00000360877.1 | 558 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CALCOCO2-017 | OTTHUMT00000360882.1 | 462 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CALCOCO2-005 | OTTHUMT00000360870.1 | 1009 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALCOCO2-020 | OTTHUMT00000360885.1 | 765 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALCOCO2-009 | OTTHUMT00000360874.1 | 750 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALCOCO2-019 | OTTHUMT00000360884.1 | 577 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALCOCO2-023 | OTTHUMT00000360888.1 | 562 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALCOCO2-032 | OTTHUMT00000440737.1 | 540 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALCOCO2-024 | OTTHUMT00000360889.1 | 519 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALCOCO2-022 | OTTHUMT00000360887.1 | 500 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALCOCO2-030 | OTTHUMT00000440740.1 | 465 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALCOCO2-029 | OTTHUMT00000360894.1 | 459 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALCOCO2-021 | OTTHUMT00000360886.1 | 336 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
