Description
UTP18, small subunit (SSU) processome component, homolog (yeast)
Synonyms
CGI-48
Location
Chromosome 17: 51,260,528-51,297,936 forward strand.
VEGA68:CM000679.2
About this gene
This gene has 9 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| UTP18-001 | OTTHUMT00000368654.1 | 1894 | 556aa | OTTHUMP00000221917 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42362 | Q9Y5J1 | |
| UTP18-005 | OTTHUMT00000368670.1 | 577 | 177aa | OTTHUMP00000221921 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| UTP18-008 | OTTHUMT00000368673.2 | 567 | 123aa | OTTHUMP00000221923 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| UTP18-009 | OTTHUMT00000368674.1 | 464 | 115aa | OTTHUMP00000221924 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| UTP18-010 | OTTHUMT00000437462.1 | 2259 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| UTP18-002 | OTTHUMT00000368655.1 | 1638 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| UTP18-007 | OTTHUMT00000368672.1 | 664 | 143aa | OTTHUMP00000221922 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QR85 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| UTP18-004 | OTTHUMT00000368669.1 | 592 | 43aa | OTTHUMP00000221920 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| UTP18-006 | OTTHUMT00000368671.1 | 897 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
