Description
transgelin
Synonyms
WS3-10, DKFZp686P11128, SM22, TAGLN1, SMCC
Location
Chromosome 11: 117,199,321-117,205,389 forward strand.
VEGA68:CM000673.2
About this gene
This gene has 10 transcripts (splice variants), 6 orthologues and 5 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TAGLN-003 | OTTHUMT00000392864.1 | 2166 | 201aa | OTTHUMP00000234995 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8381 | Q01995 | |
| TAGLN-006 | OTTHUMT00000392859.1 | 1477 | 201aa | OTTHUMP00000234992 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8381 | Q01995 | |
| TAGLN-005 | OTTHUMT00000392863.1 | 1227 | 201aa | OTTHUMP00000234994 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8381 | Q01995 | |
| TAGLN-008 | OTTHUMT00000392858.1 | 1048 | 201aa | OTTHUMP00000234991 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8381 | Q01995 | |
| TAGLN-001 | OTTHUMT00000392856.1 | 928 | 201aa | OTTHUMP00000234990 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8381 | Q01995 | |
| TAGLN-004 | OTTHUMT00000392865.1 | 501 | 151aa | OTTHUMP00000234996 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TAGLN-007 | OTTHUMT00000392861.2 | 375 | 91aa | OTTHUMP00000234993 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TAGLN-009 | OTTHUMT00000392860.1 | 3786 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TAGLN-010 | OTTHUMT00000392857.1 | 1679 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TAGLN-002 | OTTHUMT00000392862.1 | 3298 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
